Stem-loop bdi-MIR5185h

Accession

MI0025312

Description

Brachypodium distachyon bdi-MIR5185h precursor miRNA

Literature search

1 open access papers mention bdi-MIR5185h
(1 sentences)

Sequence

gugcaaacgggaucccgcgaaagucccgcUUCUAGUUCAUUUUUCAAAUCuucuauucaaaauuuugcucagaauuugaauaggagaUUUGAGAAUUGAACUAGAAGCgggacuuucgcaggauc
..........(((((.(((((((((((((((((((((((.(((((((((((((((((((((.((((....))))))))))))))))))))))))).))))))))))))))))))))))).)))))

Structure

gugcaaacgg     c                       U                     a    g 
          gaucc gcgaaagucccgcUUCUAGUUCA UUUUCAAAUCuucuauucaaa uuuu c
          ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||  
          cuagg cgcuuucagggCGAAGAUCAAGU AAGAGUUUagaggauaaguuu aaga u
----------     a                       U                     -    c 

Annotation confidence Not enough data

Genome context

4: 28275129-28275253 [+]

Mature bdi-miR5185h-5p

• Accession: MIMAT0030119
• Description: Brachypodium distachyon bdi-miR5185h-5p mature miRNA
• Sequence: 30 - UUCUAGUUCAUUUUUCAAAUC - 50
• Evidence: experimental ; Illumina [1]

Mature bdi-miR5185h-3p

• Accession: MIMAT0030120
• Description: Brachypodium distachyon bdi-miR5185h-3p mature miRNA
• Sequence: 88 - UUUGAGAAUUGAACUAGAAGC - 108
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443