Stem-loop sequence bdi-MIR7728

Accession

MI0025343 (change log)

Description

Brachypodium distachyon miR7728 stem-loop

Stem-loop

   --ccccua    ---    c                    g     c     cu 
5'         ggcc   ugcu ggauugaguguauuuuuagu ggggg uggua  u
           ||||   |||| |||||||||||||||||||| ||||| |||||   
3'         ccgg   acga cuuaacucacauaaaaauca ccccc accau  a
   guuaauuc    ucg    a                    a     a     ug 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Bd21; GCA_000005505.1): 2: 9800174-9800278 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0025343

Mature sequence bdi-miR7728-5p

• Accession: MIMAT0030188
• Sequence: 11 - ugcucggauugaguguauuuu - 31
• Evidence: experimental; Illumina [1]

Mature sequence bdi-miR7728-3p

• Accession: MIMAT0030189
• Sequence: 71 - aaauacacucaauucaagcag - 91
• Evidence: experimental; Illumina [1]

References

1. PMID:23264558 "Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon" Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E Mol Plant. 6:423-443(2013).