Stem-loop sequence pxy-mir-7a

Accession

MI0027357 (change log)

Description

Plutella xylostella miR-7a stem-loop

Literature search

1 open access papers mention pxy-mir-7a
(26 sentences)

Stem-loop

   gaa    -- u       caauuuau        a  -      -       g   u        
5'    aagu  c uagaaca        gauuuugu uc uuuguu uggacua uga ucuguug 
      ||||  | |||||||        |||||||| || |||||| ||||||| ||| |||||| u
3'    uucg  g aucuugu        uuaaaaua ag aaacaa auuuggu auu agauagu 
   uua    uu c       --------        c  u      c       -   c        

Deep sequencing

2 reads, 200 reads per million, 1 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (1.0): scaffold_268: 160739-160854 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0027357

Mature sequence pxy-miR-7a

• Accession: MIMAT0033762
• Sequence: 44 - gacuagugauucuguuguu - 62
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:24236051 "Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)" Liang P, Feng B, Zhou X, Gao X PLoS One. 8:e78787(2013).