Stem-loop pxy-mir-10

Accession

MI0027386

Description

Plutella xylostella pxy-mir-10 precursor miRNA

Literature search

3 open access papers mention pxy-mir-10
(4 sentences)

Sequence

296 reads, 9288 reads per million, 4 experiments

uagcaucaaauauuagugcccuacaucUACCCUGUAGAUCCGAAUUUGUuugaagugaggcgacAAAUUCGGUUCUAGAGAGGUUUguguggugcacg
...............((((.((((((..(((((.((((.(((((((((((...........))))))))))).)))).)).)))..)))))).)))).

Structure

uagcaucaaauauua    c      cU   -  G    U           ugaa 
               gugc cuacau  ACC CU UAGA CCGAAUUUGUu    g
               |||| ||||||  ||| || |||| |||||||||||    u
               cacg ggugug  UGG GA AUCU GGCUUAAAcag    g
--------------g    u      UU   A  G    U           cgga 

Annotation confidence Low

Genome context

scaffold_121: 165252-165349 [-]

Mature pxy-miR-10-5p

• Accession: MIMAT0033793
• Description: Plutella xylostella pxy-miR-10-5p mature miRNA
• Sequence: 28 - UACCCUGUAGAUCCGAAUUUGU - 49
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-10-3p

• Accession: MIMAT0033794
• Description: Plutella xylostella pxy-miR-10-3p mature miRNA
• Sequence: 65 - AAAUUCGGUUCUAGAGAGGUUU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787