miRBase entry: pxy-mir-8521b-7

Stem-loop pxy-mir-8521b-7


Accession
MI0027416
Description
Plutella xylostella pxy-mir-8521b-7 precursor miRNA
Gene family
MIPF0001871; mir-8521


Sequence

55 reads, 2704 reads per million, 4 experiments
uucguucuugucucuggcgcggcagucagaauucaggacaagcccggagcgguggCUUGUCCCGAAUUUUGACUCGGCCaaaucaaaaccag
...(((.(((....((((.((..(((((((((((.((((((((((......).))))))))).)))))))))))))))))...))))))...

Structure
uuc   c   ucuc    g  gc           a         - gg 
   guu uug    uggc cg  agucagaauuc ggacaagcc c  a
   ||| |||    |||| ||  ||||||||||| ||||||||| |   
   caa aac    aCCG GC  UCAGUUUUAAG CCUGUUCgg g  g
gac   -   -uaa    -  --           C         u gc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_127: 923694-923785 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from pxy-mir-8521b-7
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8521b

Accession MIMAT0033751
Description Plutella xylostella pxy-miR-8521b mature miRNA
Sequence 56 - CUUGUCCCGAAUUUUGACUCGGCC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787