Stem-loop pxy-mir-279b

Accession

MI0027421

Description

Plutella xylostella pxy-mir-279b precursor miRNA

Gene family

MIPF0000184; mir-279

Literature search

2 open access papers mention pxy-mir-279b
(8 sentences)

Sequence

47 reads, 1866 reads per million, 4 experiments

uuucucuucuggacGAUGAGUGAAUUUUUAGUUCACGuuuugacaauaccgUGACUAGAUUUUCACUCAUCCUcuaugggagcga
...(((((.((((.((((((((((..((((((.((((............))))))))))..)))))))))).)))).)))))...

Structure

uuu     c    c          UU      U    uuuug 
   cucuu ugga GAUGAGUGAA  UUUAGU CACG     a
   ||||| |||| ||||||||||  |||||| ||||      
   gaggg aucU CUACUCACUU  AGAUCA GUgc     c
agc     u    C          UU      -    cauaa 

Annotation confidence Not enough data

Genome context

scaffold_54: 779587-779671 [+]

Mature pxy-miR-279b-5p

• Accession: MIMAT0033819
• Description: Plutella xylostella pxy-miR-279b-5p mature miRNA
• Sequence: 15 - GAUGAGUGAAUUUUUAGUUCACG - 37
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-279b-3p

• Accession: MIMAT0033820
• Description: Plutella xylostella pxy-miR-279b-3p mature miRNA
• Sequence: 52 - UGACUAGAUUUUCACUCAUCCU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787