Accession
MI0027535
Description
Amborella trichopoda
atr-MIR396a precursor miRNA
Sequence
1527
reads,
597
reads per million, 3 experiments
ggaacauggaagauuugaucuuuuccaugcucUCCACAGGCUUUCUUGAACAUgcugcucaaacccgucuucugccauguucuuggagaagcaaaguugagugacaaguuuaagaaugccuggggaaaacauggaaaugaauuacaaggucggucacaaugcauauucc
((((.(((.(.((((.(((((((((((((...(((.(((((.(((((((((.((.(((((((....(.(((((.(((......)))))))))....))))))).)).))))))))).))))).)))...))))))).........))))))))))....).))).))))
((((.(((.(.((((.(((((((((((((...(((.(((((.(((((((((.((.(((((((....(.(((((.(((......)))))))))....))))))).)).))))))))).))))).)))...))))))).........))))))))))....).))).))))
Structure
c g ---a u --------- cuc A U A c accc u g ug
ggaa aug a gauu gaucuu uuccaug UCC CAGGC UUCUUGAAC Ug ugcucaa g cuucu cca u
|||| ||| | |||| |||||| ||||||| ||| ||||| ||||||||| || ||||||| | ||||| |||
ccuu uac u cugg cuggaa aagguac agg guccg aagaauuug ac gugaguu c gaaga ggu u
a g aaca - cauuaagua aaa g u a a gaaa - - uc
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00013: 1544499-1544667 [+]
Database links
Mature atr-miR396a
| Accession | MIMAT0033938 |
| Description | Amborella trichopoda atr-miR396a mature miRNA |
| Sequence | 33 - UCCACAGGCUUUCUUGAACAU - 53 |
| Evidence |
experimental
Illumina [1] |
References
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