miRBase entry: cli-mir-140

Stem-loop cli-mir-140


Accession
MI0029976
Description
Columba livia cli-mir-140 precursor miRNA


Sequence

uccguguccugcCAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucuACCACAGGGUAGAACCACGGACgggaugcugg
.((((((((((((.(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))))).)))))))).))

Structure
u  -        -  A             A       u  c  c 
 cc guguccug cC GUGGUUUUACCCU UGGUAGg ua gu  
 || |||||||| || ||||||||||||| ||||||| || || a
 gg cguagggC GG CACCAAGAUGGGA ACCAucu gu cg  
-  u        A  -             C       u  -  u 


Annotation confidence Not enough data
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Genome context
KB375448.1: 5480462-5480545 [-]

Database links

Mature cli-miR-140-5p

Accession MIMAT0038527
Description Columba livia cli-miR-140-5p mature miRNA
Sequence 13 - CAGUGGUUUUACCCUAUGGUAG - 34
Evidence experimental
Illumina [1]

Mature cli-miR-140-3p

Accession MIMAT0038528
Description Columba livia cli-miR-140-3p mature miRNA
Sequence 53 - ACCACAGGGUAGAACCACGGAC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196