Stem-loop cli-mir-199-2

Accession

MI0030004

Description

Columba livia cli-mir-199-2 precursor miRNA

Sequence

cuccgucugCCCAGUGUUCAGACUACCUGUUCaggacuacgagauugUACAGUAGUCUGCACAUUGGUUAggcugugc
....(((((.(((((((.((((((((.(((.(((..........))).))))))))))).))))))).))))).....

Structure

-cucc     C       U        C   U   gacu 
     gucug CCAGUGU CAGACUAC UGU Cag    a
     ||||| ||||||| |||||||| ||| |||     
     cggAU GGUUACA GUCUGAUG ACA guu    c
cgugu     U       C        -   U   agag 

Annotation confidence Not enough data

Genome context

KB376124.1: 50403-50480 [+]

Mature cli-miR-199-5p

• Accession: MIMAT0038573
• Description: Columba livia cli-miR-199-5p mature miRNA
• Sequence: 10 - CCCAGUGUUCAGACUACCUGUUC - 32
• Evidence: experimental ; Illumina [1]

Mature cli-miR-199-3p

• Accession: MIMAT0038574
• Description: Columba livia cli-miR-199-3p mature miRNA
• Sequence: 48 - UACAGUAGUCUGCACAUUGGUUA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196