Stem-loop cli-mir-204-1

Accession

MI0030008

Description

Columba livia cli-mir-204-1 precursor miRNA

Sequence

ucaugugacccguggacUUCCCUUUGUCAUCCUAUGCCUgagaauauaugaaggggGCUGGGAAGGCAAAGGGACGUucaacugucaucacugg
....(((((...(((((.((((((((((.(((((.((((...............))))))))).)))))))))).)))))...)))))......

Structure

--ucau     ccg     U          A     U    gagaau 
      gugac   uggac UCCCUUUGUC UCCUA GCCU      a
      |||||   ||||| |||||||||| ||||| ||||      u
      uacug   acuUG AGGGAAACGG AGGGU CGgg      a
ggucac     uca     C          A     -    ggaagu 

Annotation confidence Low

Genome context

KB375428.1: 920641-920734 [+]

Mature cli-miR-204-5p

• Accession: MIMAT0038580
• Description: Columba livia cli-miR-204-5p mature miRNA
• Sequence: 18 - UUCCCUUUGUCAUCCUAUGCCU - 39
• Evidence: experimental ; Illumina [1]

Mature cli-miR-204-3p

• Accession: MIMAT0038581
• Description: Columba livia cli-miR-204-3p mature miRNA
• Sequence: 57 - GCUGGGAAGGCAAAGGGACGU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196