Stem-loop cli-mir-1416

Accession

MI0030065

Description

Columba livia cli-mir-1416 precursor miRNA

Sequence

gguugacucucuuUCCUUAACUCAUGCCGCUGUGCcuuuuuauuuguuucACAAUUGUGUGAGUUGAGUACAgaguguc
....(((.((((...((((((((((((...((((...............))))...))))))))))))...)))).)))

Structure

gguu   u    uUC            CGC    Ccuuuu 
    gac cucu   CUUAACUCAUGC   UGUG      u
    ||| ||||   ||||||||||||   ||||      a
    cug gagA   GAGUUGAGUGUG   ACAc      u
----   u    CAU            UUA    uuuguu 

Annotation confidence Not enough data

Genome context

KB375428.1: 1182287-1182365 [-]

Mature cli-miR-1416-5p

• Accession: MIMAT0038676
• Description: Columba livia cli-miR-1416-5p mature miRNA
• Sequence: 14 - UCCUUAACUCAUGCCGCUGUGC - 35
• Evidence: experimental ; Illumina [1]

Mature cli-miR-1416-3p

• Accession: MIMAT0038677
• Description: Columba livia cli-miR-1416-3p mature miRNA
• Sequence: 51 - ACAAUUGUGUGAGUUGAGUACA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196