miRBase entry: dsi-mir-2498a

Stem-loop dsi-mir-2498a

Accession

MI0030848

Description

Drosophila simulans dsi-mir-2498a precursor miRNA

Sequence

UAAAAAGUCUGUUAUGCCUUUUuuuguguguuuuacaaAACCGUAUAACCGACUUUUACUu
..(((((((.(((((((....(((((((.....)))))))..))))))).)))))))....

Structure

--UA       U       CUUU       u 
    AAAAGUC GUUAUGC    Uuuugug g
    ||||||| |||||||    ||||||| u
    UUUUCAG CAAUAUG    AAaacau u
uUCA       C       --CC       u

Annotation confidence Not enough data

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Genome context

chr2R: 15133881-15133941 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from dsi-mir-2498a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-2498a-5p

Accession	MIMAT0039101
Description	Drosophila simulans dsi-miR-2498a-5p mature miRNA
Sequence	1 - UAAAAAGUCUGUUAUGCCUUUU - 22
Evidence	experimental Illumina [1]

Mature dsi-miR-2498a-3p

Accession	MIMAT0039102
Description	Drosophila simulans dsi-miR-2498a-3p mature miRNA
Sequence	39 - AACCGUAUAACCGACUUUUACU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250