miRBase entry: dse-mir-991

Stem-loop dse-mir-991


Accession
MI0030867
Description
Drosophila sechellia dse-mir-991 precursor miRNA


Sequence

UUUCCCAACUACAUCUAUUAAUacuuauuuuaacgucguaUUAAAGUUGAAGUUUGGAAAAu
(((((.((((.((.((.(((((((.............))))))))).)).)))).)))))..

Structure
--     C    A  U  A       uuauu 
  UUUCC AACU CA CU UUAAUac     u
  ||||| |||| || || |||||||     u
  AAAGG UUGA GU GA AAUUaug     a
uA     U    A  U  -       cugca 


Annotation confidence Not enough data
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Genome context
scaffold_1: 14027438-14027499 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dse-mir-991
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dse-miR-991-5p

Accession MIMAT0039128
Description Drosophila sechellia dse-miR-991-5p mature miRNA
Sequence 1 - UUUCCCAACUACAUCUAUUAAU - 22
Evidence experimental
Illumina [1]

Mature dse-miR-991-3p

Accession MIMAT0039129
Description Drosophila sechellia dse-miR-991-3p mature miRNA
Sequence 41 - UUAAAGUUGAAGUUUGGAAAA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250