miRBase entry: dse-mir-303

Stem-loop dse-mir-303

Accession

MI0030872

Description

Drosophila sechellia dse-mir-303 precursor miRNA

Sequence

ucuugcuUUGGCUUUAAAGGAAUCUAGUUugauuacgaaaacUAGUUUCCUCUAAGGUUUUAAAcauuaca
.........(((((((.(((((.(((((((........))))))).))))).)))))))............

Structure

---ucuugcuUU       A     U       gau 
            GGCUUUA AGGAA CUAGUUu   u
            ||||||| ||||| |||||||    
            UUGGAAU UCCUU GAUcaaa   a
acauuacAAAUU       C     U       agc

Annotation confidence Not enough data

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Genome context

scaffold_4: 2464338-2464408 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dse-mir-303

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-303-5p

Accession	MIMAT0039134
Description	Drosophila sechellia dse-miR-303-5p mature miRNA
Sequence	8 - UUGGCUUUAAAGGAAUCUAGUU - 29
Evidence	experimental Illumina [1]

Mature dse-miR-303-3p

Accession	MIMAT0039135
Description	Drosophila sechellia dse-miR-303-3p mature miRNA
Sequence	43 - UAGUUUCCUCUAAGGUUUUAAA - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250