miRBase entry: dse-mir-982b-2

Stem-loop dse-mir-982b-2

Accession

MI0030874

Description

Drosophila sechellia dse-mir-982b-2 precursor miRNA

Sequence

augcuagaucaagaacaaauaucauguaaauugcuuuuuuacaucAAAUACAGGAUAUUCGUUCUUgagcuu
.....((.((((((((.(((((((((((((.......))))))).........)))))).)))))))).)).

Structure

augcu  a        a      ---------       uu 
     ag ucaagaac aauauc         auguaaa  g
     || |||||||| ||||||         |||||||  c
     uc agUUCUUG UUAUAG         uacauuu  u
----u  g        C      GACAUAAAc       uu

Annotation confidence Not enough data

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Genome context

scaffold_4: 2465648-2465719 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dse-mir-982b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-982b

Accession	MIMAT0039136
Description	Drosophila sechellia dse-miR-982b mature miRNA
Sequence	46 - AAAUACAGGAUAUUCGUUCUU - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250