miRBase entry: dse-mir-976

Stem-loop dse-mir-976

Accession

MI0030879

Description

Drosophila sechellia dse-mir-976 precursor miRNA

Sequence

cauuggugaggacaucuccaauggcuuaguucucaucaUUGGAUUAGUUAUCAUCAAUGCCg
(((((((((.(((...((((((((...........))))))))...))).)))))))))...

Structure

---         g   auc        cuua 
   cauugguga gac   uccaaugg    g
   ||||||||| |||   ||||||||    u
   GUAACUACU UUG   AGGUUacu    u
gCC         A   AUU        acuc

Annotation confidence Not enough data

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Genome context

scaffold_8: 1735259-1735320 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from dse-mir-976

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-976

Accession	MIMAT0039143
Description	Drosophila sechellia dse-miR-976 mature miRNA
Sequence	39 - UUGGAUUAGUUAUCAUCAAUGCC - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250