miRBase entry: dse-mir-9369

Stem-loop dse-mir-9369

Accession

MI0030892

Description

Drosophila sechellia dse-mir-9369 precursor miRNA

Sequence

AGCGAGAGGGUAUUAUGUAUUCauauuuauaaaaucaggAUACAUAUUCUUCUUUGGCUUUa
(((.((((((...(((((((((..((((...))))..)))))))))...)))))).)))...

Structure

---   G      UAU         au    a 
   AGC AGAGGG   UAUGUAUUC  auuu  
   ||| ||||||   |||||||||  |||| u
   UCG UUUCUU   AUACAUAgg  uaaa  
aUU   G      CUU         ac    a

Annotation confidence Not enough data

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Genome context

scaffold_8: 1727807-1727868 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from dse-mir-9369

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-9369-5p

Accession	MIMAT0039160
Description	Drosophila sechellia dse-miR-9369-5p mature miRNA
Sequence	1 - AGCGAGAGGGUAUUAUGUAUUC - 22
Evidence	experimental Illumina [1]

Mature dse-miR-9369-3p

Accession	MIMAT0039161
Description	Drosophila sechellia dse-miR-9369-3p mature miRNA
Sequence	40 - AUACAUAUUCUUCUUUGGCUUU - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250