miRBase entry: dya-mir-2498

Stem-loop dya-mir-2498

Accession

MI0030895

Description

Drosophila yakuba dya-mir-2498 precursor miRNA

Sequence

aauauUUAAGUCUGUUCUGCUUAGAUUugugaauuugacaaAAUCUGCACAGCCGGCUUAAUguauuuu
((((((((((((.(((.(((..((((((((.......)).))))))))).))).))))))).)))))..

Structure

--     -       U   C   UU      -  ga 
  aauau UUAAGUC GUU UGC  AGAUUu gu  a
  ||||| ||||||| ||| |||  |||||| ||  u
  uuaug AAUUCGG CGA ACG  UCUAAa ca  u
uu     U       C   C   --      a  gu

Annotation confidence Not enough data

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Genome context

chr2R: 12723909-12723977 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dya-mir-2498

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dya-miR-2498-5p

Accession	MIMAT0039166
Description	Drosophila yakuba dya-miR-2498-5p mature miRNA
Sequence	6 - UUAAGUCUGUUCUGCUUAGAUU - 27
Evidence	experimental Illumina [1]

Mature dya-miR-2498-3p

Accession	MIMAT0039167
Description	Drosophila yakuba dya-miR-2498-3p mature miRNA
Sequence	42 - AAUCUGCACAGCCGGCUUAAU - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250