miRBase entry: dya-mir-2499

Stem-loop dya-mir-2499

Accession

MI0030908

Description

Drosophila yakuba dya-mir-2499 precursor miRNA

Sequence

cgugcguugacgucagcgcaaugccuuuguuugucggcAUGCGGAUGGCGUACACGUCCACAu
.((((((..((((((.((((.((((..........))))))))..))))))..)))..)))..

Structure

-c   --   ug      -g    a    uuug 
  gug  cgu  acguca  cgca ugcc    u
  |||  |||  ||||||  |||| ||||     
  CAC  GCA  UGCGGU  GCGU Acgg    u
uA   CU   CA      AG    -    cugu

Annotation confidence Not enough data

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Genome context

chrX: 11887463-11887525 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from dya-mir-2499

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dya-miR-2499

Accession	MIMAT0039181
Description	Drosophila yakuba dya-miR-2499 mature miRNA
Sequence	39 - AUGCGGAUGGCGUACACGUCCACA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250