miRBase entry: der-mir-2498b

Stem-loop der-mir-2498b

Accession

MI0030917

Description

Drosophila erecta der-mir-2498b precursor miRNA

Sequence

UUAAGUCUGUUAUGCAUACUuuugugaguuugacaaAAUGUGCACAACCGGCUUACUg
.((((((.(((.((((((.((((((.......)))))))))))).))).))))))...

Structure

--U      U   A      C      ga 
   UAAGUC GUU UGCAUA Uuuugu  g
   |||||| ||| |||||| ||||||  u
   AUUCGG CAA ACGUGU AAaaca  u
gUC      C   C      -      gu

Annotation confidence Not enough data

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Genome context

scaffold_4845: 10617479-10617536 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from der-mir-2498b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-2498b-5p

Accession	MIMAT0039196
Description	Drosophila erecta der-miR-2498b-5p mature miRNA
Sequence	1 - UUAAGUCUGUUAUGCAUACU - 20
Evidence	experimental Illumina [1]

Mature der-miR-2498b-3p

Accession	MIMAT0039197
Description	Drosophila erecta der-miR-2498b-3p mature miRNA
Sequence	37 - AAUGUGCACAACCGGCUUACU - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250