miRBase entry: der-mir-9682

Stem-loop der-mir-9682

Accession

MI0030923

Description

Drosophila erecta der-mir-9682 precursor miRNA

Sequence

UAGGGAGGAUACCUGGUGUGUuguauuuuaaaaaucaAUCAUCGGCUAUCUUUCCUAGAa
(((((((((((.((((((.((((.((((...)))))))))))))).)))))))))))...

Structure

---           C      U    u    u 
   UAGGGAGGAUA CUGGUG GUug auuu  
   ||||||||||| |||||| |||| |||| a
   AUCCUUUCUAU GGCUAC UAac uaaa  
aAG           C      -    -    a

Annotation confidence Not enough data

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Genome context

scaffold_4690: 1630746-1630805 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from der-mir-9682

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-9682-5p

Accession	MIMAT0039205
Description	Drosophila erecta der-miR-9682-5p mature miRNA
Sequence	1 - UAGGGAGGAUACCUGGUGUGU - 21
Evidence	experimental Illumina [1]

Mature der-miR-9682-3p

Accession	MIMAT0039206
Description	Drosophila erecta der-miR-9682-3p mature miRNA
Sequence	38 - AUCAUCGGCUAUCUUUCCUAGA - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250