miRBase entry: der-mir-2499

Stem-loop der-mir-2499

Accession

MI0030924

Description

Drosophila erecta der-mir-2499 precursor miRNA

Sequence

cgugcguuuaugucagcgcaaugcuuuuguuuggcggcAUGCGGAUGGCAUACACGUCCAc
.(.((((.(((((((.((((.((((..........))))))))..))))))).)))).)..

Structure

-c u    u       -g    a    uuug 
  g gcgu uauguca  cgca ugcu    u
  | |||| |||||||  |||| ||||     
  C UGCA AUACGGU  GCGU Acgg    u
cA C    C       AG    -    cggu

Annotation confidence Not enough data

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Genome context

scaffold_4690: 9687401-9687461 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from der-mir-2499

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-2499

Accession	MIMAT0039207
Description	Drosophila erecta der-miR-2499 mature miRNA
Sequence	39 - AUGCGGAUGGCAUACACGUCCA - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250