miRBase entry: der-mir-976

Stem-loop der-mir-976

Accession

MI0030929

Description

Drosophila erecta der-mir-976 precursor miRNA

Sequence

UUGGUGAGGGCAUCUCCAAUGGggagccagcaucaUUGGAUUAGUUCUCAUUAAUGCc
(((((((((((...((((((((.(......).))))))))...)))))))))))....

Structure

----           AUC        g ag 
    UUGGUGAGGGC   UCCAAUGG g  c
    |||||||||||   |||||||| |   
    AAUUACUCUUG   AGGUUacu c  c
cCGU           AUU        a ga

Annotation confidence Not enough data

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Genome context

scaffold_4690: 9688930-9688987 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from der-mir-976

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-976-5p

Accession	MIMAT0039216
Description	Drosophila erecta der-miR-976-5p mature miRNA
Sequence	1 - UUGGUGAGGGCAUCUCCAAUGG - 22
Evidence	experimental Illumina [1]

Mature der-miR-976-3p

Accession	MIMAT0039217
Description	Drosophila erecta der-miR-976-3p mature miRNA
Sequence	36 - UUGGAUUAGUUCUCAUUAAUGC - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250