miRBase entry: dvi-mir-9692

Stem-loop dvi-mir-9692

Accession

MI0030933

Description

Drosophila virilis dvi-mir-9692 precursor miRNA

Sequence

gagaggcgccaauaucauaUUGUACAUUGAACGGUAGCUAucggauguauuugauaauccUAGCAACCGUCUUUGUGCAAAacgauguggcacacauu
.....(.((((.((((...(((((((..((.((((.((((..((((..........)))))))).))))))..)))))))...)))))))).).....

Structure

gagag c    a    aua       UU  A    A    uc    guau 
     g gcca uauc   UUGUACA  GA CGGU GCUA  ggau    u
     | |||| ||||   |||||||  || |||| ||||  ||||     
     c cggu guag   AACGUGU  CU GCCA CGAU  ccua    u
uuaca a    -    caA       UU  -    A    --    auag

Annotation confidence Not enough data

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Genome context

scaffold_13042: 912386-912483 [-]

Clustered miRNAs

15 other miRNAs are < 10 kb from dvi-mir-9692

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9692-5p

Accession	MIMAT0039224
Description	Drosophila virilis dvi-miR-9692-5p mature miRNA
Sequence	20 - UUGUACAUUGAACGGUAGCUA - 40
Evidence	experimental Illumina [1]

Mature dvi-miR-9692-3p

Accession	MIMAT0039225
Description	Drosophila virilis dvi-miR-9692-3p mature miRNA
Sequence	61 - UAGCAACCGUCUUUGUGCAAA - 81
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250