miRBase entry: dvi-mir-9694

Stem-loop dvi-mir-9694

Accession

MI0030935

Description

Drosophila virilis dvi-mir-9694 precursor miRNA

Sequence

GAACGCGAGACUCACUGUUAUcguuuucuacauAACAGUUGAGUGUCGUGAUUCCA
((((((((.((((((((((((.((.....))))))))).))))).))))).)))..

Structure

--   -     G     -       c  u 
  GAA CGCGA ACUCA CUGUUAU gu u
  ||| ||||| ||||| ||||||| || u
  CUU GUGCU UGAGU GACAAua ca c
AC   A     G     U       -  u

Annotation confidence Not enough data

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Genome context

scaffold_13042: 907106-907161 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from dvi-mir-9694

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9694-5p

Accession	MIMAT0039228
Description	Drosophila virilis dvi-miR-9694-5p mature miRNA
Sequence	1 - GAACGCGAGACUCACUGUUAU - 21
Evidence	experimental Illumina [1]

Mature dvi-miR-9694-3p

Accession	MIMAT0039229
Description	Drosophila virilis dvi-miR-9694-3p mature miRNA
Sequence	34 - AACAGUUGAGUGUCGUGAUUCCA - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250