miRBase entry: dvi-mir-9695

Stem-loop dvi-mir-9695

Accession

MI0030936

Description

Drosophila virilis dvi-mir-9695 precursor miRNA

Sequence

UUAGUUGCUAAUGUGGCCGAUAUuuucaauauguuguguuaauauugcaugggcauaugcaaaaaUAAGGCACUUUAGCAGCCAAGAg
...((((((((.(((.((..((((((..(((((((.(((.......)))..)))))))...)))))).))))).))))))))......

Structure

---UUA        U   G  GA      -ca       -g   ua 
      GUUGCUAA GUG CC  UAUuuu   auauguu  ugu  a
      |||||||| ||| ||  ||||||   |||||||  |||  u
      CGACGAUU CAC GG  AUaaaa   uauacgg  acg  a
gAGAAC        U   -  -A      acg       gu   uu

Annotation confidence Not enough data

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Genome context

scaffold_13042: 903358-903445 [-]

Clustered miRNAs

11 other miRNAs are < 10 kb from dvi-mir-9695

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9695-5p

Accession	MIMAT0039230
Description	Drosophila virilis dvi-miR-9695-5p mature miRNA
Sequence	1 - UUAGUUGCUAAUGUGGCCGAUAU - 23
Evidence	experimental Illumina [1]

Mature dvi-miR-9695-3p

Accession	MIMAT0039231
Description	Drosophila virilis dvi-miR-9695-3p mature miRNA
Sequence	66 - UAAGGCACUUUAGCAGCCAAGA - 87
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250