miRBase entry: dvi-mir-9697

Stem-loop dvi-mir-9697


Accession
MI0030939
Description
Drosophila virilis dvi-mir-9697 precursor miRNA


Sequence

AGCCGUUCCUGAAGUGUCAAAUaguagguacuacucguaagaaaauguacguugauuuUUAUUUGGCACAUCAGUGACAGcaug
.((.(((.((((.((((((((((((((((((...((....))....)))).)))....))))))))))).)))).))).))...

Structure
--A  C   C    A           ----   -    -uac  g 
   GC GUU CUGA GUGUCAAAUag    uag guac    uc u
   || ||| |||| |||||||||||    ||| ||||    ||  
   cG CAG GACU CACGGUUUAUU    guu caug    ag a
gua  A   U    A           uuua   g    uaaa  a 


Annotation confidence Not enough data
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Genome context
scaffold_13042: 903020-903103 [-]
Clustered miRNAs
11 other miRNAs are < 10 kb from dvi-mir-9697
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-9697-5p

Accession MIMAT0039236
Description Drosophila virilis dvi-miR-9697-5p mature miRNA
Sequence 1 - AGCCGUUCCUGAAGUGUCAAAU - 22
Evidence experimental
Illumina [1]

Mature dvi-miR-9697-3p

Accession MIMAT0039237
Description Drosophila virilis dvi-miR-9697-3p mature miRNA
Sequence 59 - UUAUUUGGCACAUCAGUGACAG - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250