miRBase entry: dvi-mir-9699

Stem-loop dvi-mir-9699


Accession
MI0030941
Description
Drosophila virilis dvi-mir-9699 precursor miRNA


Sequence

GUACUCUACGCUUUUGGGAACGagcucuuugacgcacucGGUUCCAUUGCCGUUGAGUAGAg
.(((((.(((....(((((.((((..(......)..)))).)))))....))).)))))...

Structure
--G     U   CUUU     A    cu uu 
   UACUC ACG    UGGGA CGag  c  u
   ||||| |||    ||||| ||||  |   
   AUGAG UGC    ACCUU Gcuc  g  g
gAG     U   CGUU     G    ac ca 


Annotation confidence Not enough data
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Genome context
scaffold_13042: 902700-902761 [-]
Clustered miRNAs
11 other miRNAs are < 10 kb from dvi-mir-9699
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-9699-5p

Accession MIMAT0039240
Description Drosophila virilis dvi-miR-9699-5p mature miRNA
Sequence 1 - GUACUCUACGCUUUUGGGAACG - 22
Evidence experimental
Illumina [1]

Mature dvi-miR-9699-3p

Accession MIMAT0039241
Description Drosophila virilis dvi-miR-9699-3p mature miRNA
Sequence 40 - GGUUCCAUUGCCGUUGAGUAGA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250