miRBase entry: dvi-mir-9702

Stem-loop dvi-mir-9702

Accession

MI0030948

Description

Drosophila virilis dvi-mir-9702 precursor miRNA

Sequence

UGAGCGUCGGUUGGUGUUUGcuuucguccgugcacuugaUUAAACCCAACAAACGCUUAAa
(((((((..(((((.(((((...(((..........))).))))))))))..)))))))..

Structure

--       CG     U     cuu   uccg 
  UGAGCGU  GUUGG GUUUG   ucg    u
  |||||||  ||||| |||||   |||     
  AUUCGCA  CAACC CAAAU   agu    g
aA       AA     -     --U   ucac

Annotation confidence Not enough data

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Genome context

scaffold_12855: 6286659-6286719 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from dvi-mir-9702

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9702-5p

Accession	MIMAT0039254
Description	Drosophila virilis dvi-miR-9702-5p mature miRNA
Sequence	1 - UGAGCGUCGGUUGGUGUUUG - 20
Evidence	experimental Illumina [1]

Mature dvi-miR-9702-3p

Accession	MIMAT0039255
Description	Drosophila virilis dvi-miR-9702-3p mature miRNA
Sequence	40 - UUAAACCCAACAAACGCUUAA - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250