miRBase entry: dvi-mir-9707-2

Stem-loop dvi-mir-9707-2

Accession

MI0030959

Description

Drosophila virilis dvi-mir-9707-2 precursor miRNA

Sequence

aaacaaaauauauauuUGCCAAGUAUGCAGCACGUUGAaguuguucucguugucacAACGCAUUGCAUACAUGACAAAuuuuguuaauuugua
..(((((.((...(((((.((.((((((((..(((((..................)))))..)))))))).)).))))).....)).))))).

Structure

aa     a  --uau     C  A        CA     Aaguuguu 
  acaaa ua     auuUG CA GUAUGCAG  CGUUG        c
  ||||| ||     ||||| || ||||||||  |||||         
  uguuu au     uAAAC GU CAUACGUU  GCAAc        u
-a     a  uguuu     A  A        AC     acuguugc

Annotation confidence Not enough data

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Genome context

scaffold_12963: 330393-330485 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-9707-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9707-5p

Accession	MIMAT0039266
Description	Drosophila virilis dvi-miR-9707-5p mature miRNA
Sequence	17 - UGCCAAGUAUGCAGCACGUUGA - 38
Evidence	experimental Illumina [1]

Mature dvi-miR-9707-3p

Accession	MIMAT0039267
Description	Drosophila virilis dvi-miR-9707-3p mature miRNA
Sequence	57 - AACGCAUUGCAUACAUGACAAA - 78
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250