miRBase entry: dvi-mir-9717

Stem-loop dvi-mir-9717

Accession

MI0030981

Description

Drosophila virilis dvi-mir-9717 precursor miRNA

Sequence

CAUUGGUGUGCCCGCUUAUGAgggacucgcaaucAUUAAGCUAACACAUCAAUACAa
.(((((((((...((((((((..(.....)..))).)))))...)))))))))....

Structure

---C         CCC     -   gg a 
    AUUGGUGUG   GCUUA UGA  g c
    |||||||||   ||||| |||  | u
    UAACUACAC   CGAAU Acu  c c
aACA         AAU     U   aa g

Annotation confidence Not enough data

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Genome context

scaffold_13047: 1194059-1194115 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-9717

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9717-5p

Accession	MIMAT0039307
Description	Drosophila virilis dvi-miR-9717-5p mature miRNA
Sequence	1 - CAUUGGUGUGCCCGCUUAUGA - 21
Evidence	experimental Illumina [1]

Mature dvi-miR-9717-3p

Accession	MIMAT0039308
Description	Drosophila virilis dvi-miR-9717-3p mature miRNA
Sequence	35 - AUUAAGCUAACACAUCAAUACA - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250