miRBase entry: dvi-mir-9719

Stem-loop dvi-mir-9719

Accession

MI0030984

Description

Drosophila virilis dvi-mir-9719 precursor miRNA

Sequence

UGGGCACUUCUAAAAUAUAUAuauauauauauauauauauuuguugauaauugaacuuaUAUAUUUUAGCCGUGUUCCAUGa
(((((((..(((((((((((((((((((....)))))))...(((.(....).))).))))))))))))..))).))))...

Structure

---    -   UU            ------------------       a 
   UGGG CAC  CUAAAAUAUAUA                  uauauau u
   |||| |||  ||||||||||||                  |||||||  
   ACCU GUG  GAUUUUAUAUau                  auauaua a
aGU    U   CC            ucaaguuaauaguuguuu       u

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_13042: 2032315-2032396 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from dvi-mir-9719

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9719-5p

Accession	MIMAT0039311
Description	Drosophila virilis dvi-miR-9719-5p mature miRNA
Sequence	1 - UGGGCACUUCUAAAAUAUAUA - 21
Evidence	experimental Illumina [1]

Mature dvi-miR-9719-3p

Accession	MIMAT0039312
Description	Drosophila virilis dvi-miR-9719-3p mature miRNA
Sequence	60 - UAUAUUUUAGCCGUGUUCCAUG - 81
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250