miRBase entry: tch-mir-99b

Stem-loop tch-mir-99b


Accession
MI0031246
Description
Tupaia chinensis tch-mir-99b precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

CACCCGUAGAACCGACCUUGCGgggccuucgccgcacacaagcucgugucugugggu
.(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))

Structure
C         AC   C    --C g   c 
 ACCCGUAGA  CGA CUUG   G ggc u
 |||||||||  ||| ||||   | |||  
 ugggugucu  gcu gaac   c ccg u
-         gu   c    aca g   c 


Annotation confidence Not enough data
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Genome context
KB321018.1: 123097-123153 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tch-mir-99b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-99b-5p

Accession MIMAT0036582
Description Tupaia chinensis tch-miR-99b-5p mature miRNA
Sequence 1 - CACCCGUAGAACCGACCUUGCG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254