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miRBase |
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Stem-loop sequence rno-mir-598-2 |
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Accession | MI0031774 (change log) | ||||
Description | Rattus norvegicus miR-598-2 stem-loop | ||||
Gene family | MIPF0000393; mir-598 | ||||
Literature search |
2 open access papers mention rno-mir-598-2 | ||||
Stem-loop |
-- c c c ---u g ga 5' g ugaug uggcggugaug cgaugg gc agcu a | ||||| ||||||||||| |||||| || |||| a 3' c acuac auugcuacugc gcuacu cg ucgg a ua u u u gcau - gu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
Mature sequence rno-miR-598-5p |
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Accession | MIMAT0005324 |
Sequence |
11 - gcggugaugccgauggugcgag - 32 |
Deep sequencing | 642 reads, 94 experiments |
Evidence | experimental; cloned [1], SOLiD [2] |
Mature sequence rno-miR-598-3p |
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Accession | MIMAT0005325 |
Sequence |
48 - uacgucaucgucgucaucguua - 69 |
Deep sequencing | 166598 reads, 434 experiments |
Evidence | experimental; cloned [1], SOLiD [2] |
References |
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1 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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