Stem-loop rno-mir-344b-3

Accession

MI0031778

Description

Rattus norvegicus rno-mir-344b-3 precursor miRNA

Literature search

8 open access papers mention rno-mir-344b-3
(36 sentences)

Sequence

1374 reads, 6 reads per million, 78 experiments

ugaucAGUCAGGCUGCUGGUUAUAUUCcaggacuucucugguccugGGUAUAACCAAAGCCCGACUGUuaa
(((.(((((.((((..(((((((((.((((((((.....))))))))))))))))).)))).)))))))).

Structure

-   u     A    GC         U        u 
 uga cAGUC GGCU  UGGUUAUAU Ccaggacu c
 ||| ||||| ||||  ||||||||| |||||||| u
 auU GUCAG CCGA  ACCAAUAUG Gguccugg c
a   -     C    -A         -        u 

Annotation confidence Medium

Genome context

chr1: 121201252-121201322 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from rno-mir-344b-3

Mature rno-miR-344b-5p

• Accession: MIMAT0017811
• Description: Rattus norvegicus rno-miR-344b-5p mature miRNA
• Sequence: 6 - AGUCAGGCUGCUGGUUAUAUUC - 27
• Evidence: experimental ; SOLiD [1]

Mature rno-miR-344b-3p

• Accession: MIMAT0017812
• Description: Rattus norvegicus rno-miR-344b-3p mature miRNA
• Sequence: 47 - GGUAUAACCAAAGCCCGACUGU - 68
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249