Stem-loop sequence aca-mir-142

Accession

MI0018752 (change log)

Description

Anolis carolinensis miR-142 stem-loop

Gene family

MIPF0000084; mir-142

Stem-loop

   gg      g                 a         -uaaac  c 
5'   acagug acucauccauaaaguag aagcacuac      gc u
     |||||| ||||||||||||||||| |||||||||      ||  
3'   ugucau ugaguagguauuucauc uuugugaug      cg g
   -g      g                 c         ugaacc  u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AnoCar2.0; GCA_000090745.2): GL343287.1: 1405158-1405247 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0018752

Mature sequence aca-miR-142-5p

• Accession: MIMAT0021767
• Sequence: 17 - cauaaaguagaaagcacuacua - 38
• Evidence: experimental; Illumina [1]

Mature sequence aca-miR-142-3p

• Accession: MIMAT0021768
• Sequence: 55 - uguaguguuuccuacuuuaug - 75
• Evidence: experimental; Illumina [1]

References

1. PMID:21775315 "MicroRNAs support a turtle + lizard clade" Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ Biol Lett. 8:104-107(2012).