Stem-loop mdo-mir-32

Accession

MI0005279

Description

Monodelphis domestica mdo-mir-32 precursor miRNA

Sequence

1219 reads, 26 reads per million, 4 experiments

ggagaUAUUGCACAUUACUAAGUUGCauguugucacggcuuuagugcAAUUUAGUAUGUGUGAUAUUuu
.((((((((((((((.((((((((((((...((....))....))))))))))))))))))))))))))

Structure

g              U            -guu  c 
 gagaUAUUGCACAU ACUAAGUUGCau    gu a
 |||||||||||||| ||||||||||||    ||  
 uuUUAUAGUGUGUA UGAUUUAAcgug    cg c
-              -            auuu  g 

Annotation confidence High

Genome context

chr6: 135714003-135714071 [+]

Mature mdo-miR-32-5p

• Accession: MIMAT0004095
• Description: Monodelphis domestica mdo-miR-32-5p mature miRNA
• Sequence: 6 - UAUUGCACAUUACUAAGUUGC - 26
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-32-3p

• Accession: MIMAT0026654
• Description: Monodelphis domestica mdo-miR-32-3p mature miRNA
• Sequence: 48 - AAUUUAGUAUGUGUGAUAUU - 67
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45