miRBase entry: 17965199

In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica

PubMed ID 17965199
Authors "Devor EJ, Samollow PB"
Journal "J Hered
Volume 99
Pages 66-72

There are 119 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
mdo-mir-1-1 MI0005269 98802 chr3 263364374 263364459 + -
mdo-mir-7 MI0005270 71 chr6 127713720 127713796 + -
mdo-mir-9a-2 MI0005271 25259 chr3 215711846 215711932 + High
mdo-mir-9a-1 MI0005272 25316 chr1 122711570 122711659 - -
mdo-mir-10a MI0005273 17651 chr2 201156732 201156821 - High
mdo-mir-10b MI0005274 8857 chr4 187496024 187496134 + -
mdo-mir-21 MI0005275 7751 chr2 172169920 172169993 - -
mdo-mir-22 MI0005276 1459 chr2 517205525 517205605 - High
mdo-mir-30a MI0005277 46590 chr2 322692512 322692583 - High
mdo-mir-31 MI0005278 164 chr6 35734628 35734714 - High
mdo-mir-32 MI0005279 26 chr6 135714003 135714071 + High
mdo-mir-34a MI0005280 65 chr4 433575257 433575367 + High
mdo-mir-100 MI0005281 10012 chr4 226180101 226180180 + High
mdo-mir-101-2 MI0005282 12997 chr6 166669166 166669244 + -
mdo-mir-101-1 MI0005283 12529 chr2 26267862 26267944 + High
mdo-mir-103-1 MI0005284 3052 chr1 367063025 367063100 - High
mdo-mir-103-2 MI0005285 3056 chr1 727148312 727148395 - High
mdo-mir-107 MI0005286 74 chr1 81981106 81981189 + -
mdo-mir-122 MI0005287 18 chr3 247368064 247368137 - -
mdo-mir-124a-1 MI0005288 3546 chr1 587846264 587846348 + High
mdo-mir-124a-2 MI0005289 3546 chr3 173742224 173742316 - High
mdo-mir-124a-3 MI0005290 3560 chr1 474834580 474834647 - High
mdo-mir-125b-1 MI0005291 2169 chr4 1003541 1003622 + High
mdo-mir-125b-2 MI0005292 2187 chr4 226229991 226230053 + High
mdo-mir-128a MI0005293 1810 chr6 290241098 290241181 - High
mdo-mir-129 MI0005294 3696 chr8 188064158 188064231 + High
mdo-mir-130a MI0005295 176 chr5 291845601 291845676 + -
mdo-mir-133a-1 MI0005296 275 chr3 263368065 263368151 + High
mdo-mir-135a MI0005297 88 chr8 74872640 74872739 + High
mdo-mir-135b MI0005298 15 chr2 111348471 111348570 - High
mdo-mir-137a MI0005299 1319 chr2 463982402 463982457 - -
mdo-mir-138 MI0005300 371 chr1 447811941 447812023 + -
mdo-mir-142 MI0005301 471 chr2 174133935 174134008 + -
mdo-mir-143 MI0005302 45260 chr1 377176751 377176813 - High
mdo-mir-144 MI0005303 741 chr2 506777490 506777574 - High
mdo-mir-451 MI0005304 1367 chr2 506777375 506777436 - -
mdo-mir-145 MI0005305 209 chr1 377173845 377173914 - -
mdo-mir-152 MI0005306 649 chr2 200362981 200363053 - High
mdo-mir-182 MI0005307 447 chr8 189660601 189660671 - -
mdo-mir-184 MI0005308 6428 chr1 120539101 120539184 - High
mdo-mir-187 MI0005309 366 chr3 87606200 87606280 + High
mdo-mir-181a-3 MI0005310 26516 chr3 446461502 446461573 - High
mdo-mir-186 MI0005311 371 chr2 20448567 20448634 + High
mdo-mir-193a MI0005312 59 chr2 504311646 504311711 - High
mdo-mir-196b MI0005313 1257 chr8 297346795 297346880 + -
mdo-mir-199b-1 MI0005314 779 chr1 453998859 453998947 - High
mdo-mir-203 MI0005315 36 chr1 311187371 311187451 - -
mdo-mir-204 MI0005316 50 chr1 142496646 142496742 - -
mdo-mir-206 MI0005317 1756 chr2 300498999 300499074 + -
mdo-mir-208a MI0005318 12 chr1 172794234 172794310 - -
mdo-mir-214 MI0005319 10 chr2 64368078 64368187 - -
mdo-mir-216 MI0005320 1 chr1 638493848 638493944 + -
mdo-mir-217 MI0005321 1 chr1 638507640 638507721 + -
mdo-mir-218-1 MI0005322 103 chr5 208287227 208287335 - -
mdo-mir-219-1 MI0005323 702 chr1 454138610 454138700 - High
mdo-mir-223 MI0005324 6 chrX 10078238 10078348 - High
mdo-mir-338 MI0005325 337 chr2 233883739 233883827 + High
mdo-mir-365 MI0005326 13 chr6 108690913 108690999 + High
mdo-mir-375 MI0005327 127 chr7 173725890 173725952 + -
mdo-mir-383 MI0005328 14 chr5 17427574 17427643 + High
mdo-mir-449a MI0005329 344 chr3 17545606 17545684 - -
mdo-let-7a-2 MI0005330 45193 chr4 226185493 226185565 + High
mdo-let-7g MI0005331 4532 chr6 277022691 277022773 + High
mdo-let-7i MI0005332 462 chr8 22252146 22252229 + High
mdo-mir-15a MI0005333 59 chr4 318199416 318199498 + -
mdo-mir-16-1 MI0005334 364 chr4 318199560 318199649 + High
mdo-mir-183 MI0005335 216 chr8 189668265 189668352 - -
mdo-mir-96 MI0005336 27 chr8 189667847 189667943 - -
mdo-mir-212 MI0005337 85 chr2 517587363 517587453 - High
mdo-mir-132 MI0005338 444 chr2 517586549 517586614 - High
mdo-mir-200c MI0005339 333 chr8 108475449 108475516 + High
mdo-mir-141 MI0005340 192 chr8 108475859 108475922 + High
mdo-mir-191 MI0005341 545 chr6 201970817 201970890 - High
mdo-mir-425 MI0005342 97 chr6 201968551 201968635 - High
mdo-mir-181a-1 MI0005343 26518 chr2 99873079 99873142 - High
mdo-mir-181b-1 MI0005344 2479 chr2 99872867 99872953 - High
mdo-mir-200b MI0005345 528 chr4 389166960 389167027 + High
mdo-mir-200a MI0005346 605 chr4 389169611 389169696 + High
mdo-mir-222a MI0005347 135 chr4 17426716 17426783 + -
mdo-mir-221 MI0005348 932 chr4 17427280 17427353 + High
mdo-let-7f-2 MI0005349 29228 NW_001583589.1 35394 35473 - High
mdo-let-7a-3 MI0005350 45516 chr8 11049697 11049775 - High
mdo-let-7b MI0005351 34656 chr8 11048200 11048287 - High
mdo-mir-29b-1 MI0005352 929 chr8 190600820 190600905 - High
mdo-mir-29a-1 MI0005353 555 chr8 190600409 190600472 - High
mdo-mir-17 MI0005354 181 chr7 108468894 108468978 - High
mdo-mir-18a MI0005355 60 chr7 108468760 108468831 - High
mdo-mir-19a MI0005356 16 chr7 108468609 108468689 - -
mdo-mir-20a MI0005357 297 chr7 108468430 108468531 - High
mdo-mir-19b-1 MI0005358 78 chr7 108468305 108468393 - High
mdo-mir-92a-1 MI0005359 996 chr7 108468191 108468268 - High
mdo-let-7a-1 MI0005360 45337 chr6 256413193 256413284 - High
mdo-let-7f-1 MI0005361 27835 chr6 256412444 256412530 - -
mdo-let-7d MI0005362 1281 chr6 256407623 256407728 - High
mdo-mir-23a MI0005363 274 chr3 446525826 446525898 + -
mdo-mir-27a MI0005364 474 chr3 446525995 446526080 + High
mdo-mir-24-2 MI0005365 1320 chr3 446526144 446526216 + -
mdo-mir-23b MI0005366 725 chr6 17695901 17695974 + -
mdo-mir-27b MI0005367 2693 chr6 17696090 17696186 + High
mdo-mir-24-1 MI0005368 16 chr6 17696508 17696564 + -
mdo-mir-93 MI0005369 167 chr2 257689983 257690071 + -
mdo-mir-25 MI0005370 155 chr2 257690280 257690362 + -
mdo-mir-302b MI0005371 1 chr5 66075008 66075078 - -
mdo-mir-302c MI0005372 0 chr5 66074864 66074922 - -
mdo-mir-302a MI0005373 1 chr5 66074649 66074718 - -
mdo-mir-302d MI0005374 0 chr5 66074486 66074556 - -
mdo-mir-367 MI0005375 0 chr5 66074337 66074399 - -
mdo-mir-1540a MI0007263 None chr1 580149257 580149333 - -
mdo-mir-1541 MI0007264 24443 chr4 400891414 400891481 - -
mdo-mir-1542-1 MI0007265 1742 chr8 87784786 87784857 - High
mdo-mir-1542-2 MI0007266 1716 chr8 87784982 87785061 - High
mdo-mir-1543 MI0007267 40 chr1 330615489 330615562 + -
mdo-mir-340 MI0007268 456 chr1 72640994 72641094 + High
mdo-mir-1544a MI0007269 644 chrX 14005428 14005509 - High
mdo-mir-1545a MI0007270 49 chrX 14003847 14003918 - High
mdo-mir-1546 MI0007271 2177 chr3 518067372 518067460 - High
mdo-mir-1547 MI0007272 2966 chr4 335163695 335163785 - High
mdo-mir-1548 MI0007273 246 chr2 541547258 541547317 - High
mdo-mir-1549 MI0007274 560 NW_001586660.1 16844 16906 + High



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