Stem-loop mdo-mir-383

Accession

MI0005328

Description

Monodelphis domestica mdo-mir-383 precursor miRNA

Sequence

389 reads, 14 reads per million, 5 experiments

cucAGAUCAGAAGGUGAUUGUGGCUuucgguagacauggaacagCCACAUCACUGGCUGGUCAGAaagag
.((.((((((..((((((.(((((((((.((....)).))).))))))))))))..)))))).)).....

Structure

----c  A      AA      U      -   g  a 
     uc GAUCAG  GGUGAU GUGGCU uuc gu g
     || ||||||  |||||| |||||| ||| ||  
     AG CUGGUC  UCACUA CACCga aag ua a
gagaa  A      GG      -      c   g  c 

Annotation confidence High

Genome context

chr5: 17427574-17427643 [+]

Mature mdo-miR-383-5p

• Accession: MIMAT0004139
• Description: Monodelphis domestica mdo-miR-383-5p mature miRNA
• Sequence: 4 - AGAUCAGAAGGUGAUUGUGGCU - 25
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-383-3p

• Accession: MIMAT0026684
• Description: Monodelphis domestica mdo-miR-383-3p mature miRNA
• Sequence: 45 - CCACAUCACUGGCUGGUCAGA - 65
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45