Stem-loop pma-mir-10b

Accession

MI0017009

Description

Petromyzon marinus pma-mir-10b precursor miRNA

Sequence

cggcccggguccgcuUACCCUGUAGGUACGACCUUGCguguccacaaaaagguugcAAGGUUGUGACUACAGCGUACGcggccccgggaac
...((((((.((((.(((.((((((..(((((((((((...((.......)).)))))))))))..)))))).))).)))).))))))...

Structure

cgg      u    u   C      GU           ugu  ac 
   cccggg ccgc UAC CUGUAG  ACGACCUUGCg   cc  a
   |||||| |||| ||| ||||||  |||||||||||   ||  a
   gggccc ggcG AUG GACAUC  UGUUGGAAcgu   gg  a
caa      c    C   C      AG           --u  aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-10b-5p

• Accession: MIMAT0019376
• Description: Petromyzon marinus pma-miR-10b-5p mature miRNA
• Sequence: 16 - UACCCUGUAGGUACGACCUUGC - 37
• Evidence: experimental ; 454 [1]

Mature pma-miR-10b-3p

• Accession: MIMAT0019377
• Description: Petromyzon marinus pma-miR-10b-3p mature miRNA
• Sequence: 57 - AAGGUUGUGACUACAGCGUACG - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383