Stem-loop pma-mir-23a

Accession

MI0017026

Description

Petromyzon marinus pma-mir-23a precursor miRNA

Sequence

ugcugagUGGGGUUCCUGGCACGGUGAUUUguaaugugcagagacaaaaAUCACAUUGCCAGGGAUUACCGCucagug
.((((((((((((((((((((..(((((((....(((......))).)))))))..))))))))))).))))))))).

Structure

u         -           CG       guaa   gc 
 gcugagUGG GGUUCCUGGCA  GUGAUUU    ugu  a
 ||||||||| |||||||||||  |||||||    |||   
 ugacuCGCC UUAGGGACCGU  CACUAaa    aca  g
g         A           UA       ---a   ga 

Annotation confidence Not enough data

Genome context

GL477342.1: 28461-28538 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pma-mir-23a

Mature pma-miR-23a-5p

• Accession: MIMAT0019402
• Description: Petromyzon marinus pma-miR-23a-5p mature miRNA
• Sequence: 8 - UGGGGUUCCUGGCACGGUGAUUU - 30
• Evidence: experimental ; 454 [1]

Mature pma-miR-23a-3p

• Accession: MIMAT0019403
• Description: Petromyzon marinus pma-miR-23a-3p mature miRNA
• Sequence: 50 - AUCACAUUGCCAGGGAUUACCGC - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383