Stem-loop pma-mir-190b

Accession

MI0017095

Description

Petromyzon marinus pma-mir-190b precursor miRNA

Sequence

cuugcaagccacugucUGAUAUGUUUGGUAUAAGGUUGuuucaguaacaaucaACUGUAUAUCAAACAUAUGGUCacaguagcuugcuca
...((((((.(((((.(.((((((((((((((.(((((.............))))).)))))))))))))).)..))))).))))))...

Structure

cuu      c     -c G              A     uuuca 
   gcaagc acugu  U AUAUGUUUGGUAUA GGUUG     g
   |||||| |||||  | |||||||||||||| |||||     u
   cguucg ugaca  G UAUACAAACUAUAU UCAac     a
acu      a     CU G              G     uaaca 

Annotation confidence Not enough data

Genome context

GL480176.1: 11232-11321 [+]

Mature pma-miR-190b-5p

• Accession: MIMAT0019495
• Description: Petromyzon marinus pma-miR-190b-5p mature miRNA
• Sequence: 17 - UGAUAUGUUUGGUAUAAGGUUG - 38
• Evidence: experimental ; 454 [1]

Mature pma-miR-190b-3p

• Accession: MIMAT0019496
• Description: Petromyzon marinus pma-miR-190b-3p mature miRNA
• Sequence: 54 - ACUGUAUAUCAAACAUAUGGUC - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383