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miRBase |
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Stem-loop sequence cel-mir-66 |
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Accession | MI0000037 (change log) | |||||||||
Description | Caenorhabditis elegans miR-66 stem-loop | |||||||||
Literature search |
3 open access papers mention cel-mir-66 | |||||||||
Stem-loop |
------ aaa aca a g gaauguu 5' ccaca augccau ugacacug uuagggau ugau a ||||| ||||||| |||||||| |||||||| |||| 3' ggugu ugcggua acuguggc aauccuua acua a gauguu --a caa - a gcccuag |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence cel-miR-66-5p |
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Accession | MIMAT0000038 |
Previous IDs | cel-miR-66 |
Sequence |
17 - caugacacugauuagggauguga - 39 |
Deep sequencing | 906083 reads, 17 experiments |
Evidence | experimental; cloned [1-2], Northern [1], 454 [3], Illumina [4-5] |
Database links |
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Predicted targets |
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Mature sequence cel-miR-66-3p |
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Accession | MIMAT0020315 |
Previous IDs | cel-miR-66* |
Sequence |
60 - aaauuccuaacggugucaaac - 80 |
Deep sequencing | 592 reads, 15 experiments |
Evidence | experimental; Illumina [5] |
Database links |
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References |
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1 |
PMID:11679671
"An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans"
Science. 294:858-862(2001).
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2 |
PMID:12672692
"The microRNAs of Caenorhabditis elegans"
Genes Dev. 17:991-1008(2003).
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3 |
PMID:17174894
"Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans"
Cell. 127:1193-1207(2006).
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5 |