miRBase entry: 17174894

Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans

PubMed ID 17174894
Authors "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
Journal "Cell
Volume 127
Pages 1193-1207

There are 126 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
cel-let-7 MI0000001 15959 chrX 14744173 14744271 - High
cel-lin-4 MI0000002 2214 chrII 5902254 5902347 + High
cel-mir-1 MI0000003 57505 chrI 6172662 6172757 - High
cel-mir-2 MI0000004 1579 chrI 9372768 9372865 - High
cel-mir-34 MI0000005 2563 chrX 2969752 2969848 - High
cel-mir-35 MI0000006 81584 chrII 11537608 11537704 + High
cel-mir-36 MI0000007 4419 chrII 11537713 11537809 + High
cel-mir-37 MI0000008 59877 chrII 11537833 11537930 + High
cel-mir-38 MI0000009 806 chrII 11537933 11538027 + High
cel-mir-39 MI0000010 1545 chrII 11538089 11538175 + High
cel-mir-40 MI0000011 11677 chrII 11538184 11538275 + High
cel-mir-41 MI0000012 525 chrII 11538308 11538404 + High
cel-mir-42 MI0000013 559 chrII 11889811 11889905 + High
cel-mir-43 MI0000014 113 chrII 11889910 11890007 + High
cel-mir-44 MI0000015 20134 chrII 11890023 11890118 + High
cel-mir-45 MI0000016 19744 chrII 11880944 11881039 - High
cel-mir-46 MI0000017 615 chrIII 13660515 13660611 + High
cel-mir-47 MI0000018 643 chrX 13921250 13921346 + High
cel-mir-48 MI0000019 63505 chrV 14364412 14364509 - High
cel-mir-49 MI0000020 573 chrX 9989282 9989378 + High
cel-mir-50 MI0000021 568 chrI 1738635 1738733 + High
cel-mir-51 MI0000022 1808 chrIV 11026013 11026112 - High
cel-mir-52 MI0000023 11353 chrIV 14034008 14034107 + High
cel-mir-53 MI0000024 412 chrIV 11027593 11027691 - High
cel-mir-54 MI0000025 3523 chrX 13144996 13145094 - High
cel-mir-55 MI0000026 3706 chrX 13144827 13144924 - High
cel-mir-56 MI0000027 3018 chrX 13144691 13144787 - High
cel-mir-57 MI0000028 1321 chrII 7850499 7850597 - High
cel-mir-58a MI0000029 269408 chrIV 3233254 3233350 + High
cel-mir-59 MI0000030 1263 chrIV 11309154 11309253 - High
cel-mir-60 MI0000031 2850 chrII 6328702 6328799 - High
cel-mir-61 MI0000032 1161 chrV 11770060 11770156 - High
cel-mir-62 MI0000033 923 chrX 12692608 12692665 + -
cel-mir-63 MI0000034 1712 chrX 17598765 17598868 - High
cel-mir-64 MI0000035 6350 chrIII 2172848 2172957 + High
cel-mir-65 MI0000036 7071 chrIII 2173002 2173101 + High
cel-mir-66 MI0000037 8154 chrIII 2173108 2173206 + High
cel-mir-67 MI0000038 1225 chrIII 5931349 5931447 - High
cel-mir-70 MI0000041 34070 chrV 6665536 6665635 - High
cel-mir-71 MI0000042 39340 chrI 9379927 9380020 - High
cel-mir-72 MI0000043 52125 chrII 2452838 2452936 + High
cel-mir-73 MI0000044 10217 chrX 2368765 2368863 + High
cel-mir-74 MI0000045 310 chrX 2369043 2369139 + High
cel-mir-75 MI0000046 2431 chrX 2372453 2372549 + High
cel-mir-76 MI0000047 38 chrIII 3142045 3142141 + High
cel-mir-77 MI0000048 4062 chrII 12519268 12519367 + High
cel-mir-78 MI0000049 96 chrIV 15165647 15165742 + -
cel-mir-79 MI0000050 5191 chrI 9332946 9333043 + High
cel-mir-80 MI0000051 13185 chrIII 8865270 8865367 - High
cel-mir-81 MI0000052 12922 chrX 2431072 2431179 + High
cel-mir-82 MI0000053 11441 chrX 2435258 2435354 - High
cel-mir-83 MI0000054 1364 chrIV 7841631 7841728 + High
cel-mir-84 MI0000055 4377 chrX 16022404 16022478 - High
cel-mir-85 MI0000056 2578 chrII 8393553 8393658 + High
cel-mir-86 MI0000057 1328 chrIII 11936637 11936734 - High
cel-mir-87 MI0000058 946 chrV 12038688 12038781 - High
cel-mir-90 MI0000059 623 chrIII 8873987 8874084 - High
cel-mir-124 MI0000302 561 chrIV 11871738 11871833 + High
cel-mir-228 MI0000303 18727 chrIV 5562025 5562122 + High
cel-mir-229 MI0000304 4368 chrIII 2172452 2172566 + High
cel-mir-230 MI0000305 701 chrX 5803892 5803989 + High
cel-mir-231 MI0000306 335 chrIII 7545057 7545155 - High
cel-mir-232 MI0000307 247 chrIV 10994169 10994266 - High
cel-mir-233 MI0000308 292 chrX 12078587 12078684 - High
cel-mir-234 MI0000309 76 chrII 14466263 14466358 - High
cel-mir-235 MI0000310 846 chrI 6162291 6162387 - High
cel-mir-236 MI0000311 809 chrII 7030180 7030277 - High
cel-mir-237 MI0000312 394 chrX 8154084 8154182 + High
cel-mir-238 MI0000313 2192 chrIII 8867328 8867425 - High
cel-mir-239a MI0000314 1008 chrX 11792445 11792542 + High
cel-mir-239b MI0000315 130 chrX 11791302 11791399 - High
cel-mir-240 MI0000316 255 chrX 7882622 7882718 + High
cel-mir-241 MI0000317 1755 chrV 14366188 14366283 - High
cel-mir-242 MI0000318 30 chrIV 4274247 4274342 + -
cel-mir-243 MI0000319 466 chrIV 4450779 4450876 + High
cel-mir-244 MI0000320 464 chrI 4684316 4684414 - High
cel-mir-245 MI0000321 53 chrI 7887371 7887467 + -
cel-mir-246 MI0000322 579 chrIV 10940134 10940230 + High
cel-mir-247 MI0000323 8 chrX 4756971 4757068 + -
cel-mir-248 MI0000324 271 chrX 2262373 2262470 - -
cel-mir-249 MI0000325 16 chrX 3006440 3006536 - -
cel-mir-250 MI0000326 3282 chrV 11769917 11770015 - High
cel-mir-251 MI0000327 24 chrX 11004728 11004824 + -
cel-mir-252 MI0000328 448 chrII 11446863 11446960 - High
cel-mir-253 MI0000329 733 chrV 5780510 5780616 - High
cel-mir-254 MI0000330 75 chrX 11333531 11333630 - High
cel-mir-255 MI0000331 80 chrV 5440639 5440748 + High
cel-mir-259 MI0000336 148 chrV 10539025 10539125 - High
cel-mir-355 MI0000754 252 chrII 11833536 11833645 - -
cel-mir-357 MI0000756 20 chrV 8580542 8580651 - -
cel-mir-358 MI0000757 29 chrV 8580858 8580967 - High
cel-mir-359 MI0000758 41 chrX 3004291 3004400 + -
cel-mir-392 MI0000819 37 chrX 13597231 13597340 + High
cel-mir-784 MI0005184 176 chrX 8074922 8075009 - -
cel-mir-785 MI0005185 71 chrX 3004668 3004761 + -
cel-mir-786 MI0005186 300 chrX 7882751 7882840 + High
cel-mir-787 MI0005187 15 chrX 11294708 11294797 + -
cel-mir-788 MI0005188 190 chrX 8485294 8485371 - High
cel-mir-789-1 MI0005189 28 chrIV 16740693 16740789 - High
cel-mir-789-2 MI0005190 58 chrIV 17309307 17309403 - High
cel-mir-790 MI0005191 92 chrIV 5566422 5566491 + High
cel-mir-791 MI0005192 78 chrX 5809349 5809433 + High
cel-mir-792 MI0005193 57 chrV 3042092 3042181 - -
cel-mir-793 MI0005194 85 chrX 13857962 13858053 + -
cel-mir-794 MI0005195 30 chrI 12595690 12595773 + High
cel-mir-795 MI0005196 417 chrI 12594569 12594657 + High
cel-mir-796 MI0005197 473 chrX 1798928 1799016 - -
cel-mir-797 MI0005198 40 chrX 4757109 4757197 + High
cel-mir-798 MI0005199 18 chrIV 14277312 14277387 - -
cel-mir-799 MI0005200 37 chrX 8600643 8600735 - -
cel-mir-800 MI0005201 22 chrX 380919 380991 - High
cbr-mir-784 MI0005417 None chrX 13857294 13857370 - -
cbr-mir-785a MI0005418 None chrX 8055311 8055413 + -
cbr-mir-786 MI0005419 None chrX 13610815 13610905 + -
cbr-mir-787 MI0005420 None chrX 5308342 5308431 - -
cbr-mir-788 MI0005421 None chrX 16382868 16382950 + -
cbr-mir-789 MI0005423 None chrV 3561062 3561157 + -
cbr-mir-790-1 MI0005424 None chrIV 6048840 6048938 + -
cbr-mir-790-2 MI0005425 None chrIV 6048230 6048296 + -
cbr-mir-791 MI0005426 None chrX 11146136 11146221 + -
cbr-mir-792 MI0005427 None chrI 12145945 12146035 + -
cbr-mir-235a MI0005428 None chrI 10817705 10817786 - -
cbr-mir-242 MI0005429 None chrII 15031448 15031553 - -
cbr-mir-255 MI0005430 None chrV 11365767 11365860 + -
cbr-mir-359 MI0005431 None chrX 8054854 8054940 + -
cbr-mir-392 MI0005432 None chrX 19329031 19329124 + -



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