Accession
MI0000758
Description
Caenorhabditis elegans
cel-mir-359 precursor miRNA mir-359
Gene
family?
family?
RF00903;
mir-359
Literature search
1 open access papers mention cel-mir-359
(1 sentences)
(1 sentences)
Sequence
635
reads,
41
reads per million, 12 experiments
aaugcuccuugaaauuucaaucguuagaguaacacacaguuacacgaccucaucaaucgugUCACUGGUCUUUCUCUGACGAAuugaaguucuggagacaauuuugguug
..((((((..(((.(((((((((((((((.((.((.((((.((((((.........)))))).)))))).)).)))))))).)))))))))).)))).))..........
..((((((..(((.(((((((((((((((.((.((.((((.((((((.........)))))).)))))).)).)))))))).)))))))))).)))).))..........
Structure
--------aa - uu a - u c a u ccu
ug cucc gaa uuucaau cguuagag aa ac cagu acacga c
|| |||| ||| ||||||| |||||||| || || |||| |||||| a
ac gagg cuu gaaguuA GCAGUCUC UU UG GUCA Ugugcu u
guugguuuua a -u - A U C - C aac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing [1]. The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [2].
Genome context
chrX: 3004291-3004400 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cel-mir-359
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cel-miR-359
| Accession | MIMAT0000701 |
| Description | Caenorhabditis elegans cel-miR-359 mature miRNA |
| Sequence | 62 - UCACUGGUCUUUCUCUGACGAA - 83 |
| Evidence |
experimental
cloned [1-2], PCR [1], Illumina [3] |
| Database links |
|
| Predicted targets |
|
References
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