Accession
MI0000036
Description
Caenorhabditis elegans
cel-mir-65 precursor miRNA
Sequence
1156531
reads,
6900
reads per million, 16 experiments
auggagccuucgccgauUAUGACACUGAAGCGUAACCGAAcaccauauuuugagauuCUGCUACGCGCAGUGCCAUGCucggcgcguuggcuccauuaaa
((((((((..((((((.((((.(((((..(((((.(.(((...((.....))...))).).))))).))))).)))).))))))....))))))))....
((((((((..((((((.((((.(((((..(((((.(.(((...((.....))...))).).))))).))))).)))).))))))....))))))))....
Structure
---- --uu u A AA A C cac u
auggagcc cgccga UAUG CACUG GCGUA C GAA ca a
|||||||| |||||| |||| ||||| ||||| | ||| || u
uaccucgg gcggcu GUAC GUGAC CGCAU G Cuu gu u
aaau uugc C C -G C U aga u
Annotation confidence
Medium
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Genome context
chrIII: 2173002-2173101 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cel-mir-65
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cel-miR-65-5p
| Accession | MIMAT0000037 |
| Description | Caenorhabditis elegans cel-miR-65-5p mature miRNA |
| Sequence | 18 - UAUGACACUGAAGCGUAACCGAA - 40 |
| Evidence |
experimental
Northern [1], cloned [2-3], 454 [4], Illumina [5], CLIPseq [6] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-65-3p
| Accession | MIMAT0015106 |
| Description | Caenorhabditis elegans cel-miR-65-3p mature miRNA |
| Sequence | 58 - CUGCUACGCGCAGUGCCAUGC - 78 |
| Evidence |
experimental
CLIPseq [6] |
| Database links |
|
References
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