Accession
MI0000045
Description
Caenorhabditis elegans
cel-mir-74 precursor miRNA mir-74
Gene
family?
family?
RF00830;
mir-74
Literature search
1 open access papers mention cel-mir-74
(1 sentences)
(1 sentences)
Sequence
13382
reads,
310
reads per million, 16 experiments
aaaugguucaaaaaacguuCGGGCUUCCAUCUCUUUCCCAGCcuacaucucaaccugggcUGGCAAGAAAUGGCAGUCUACAcguuuuucaaccaaa
...(((((..((((((((..(((((.((((.((((..((((((((..........)))))))).)))).)))).)))))..)))))))).)))))..
...(((((..((((((((..(((((.((((.((((..((((((((..........)))))))).)))).)))).)))))..)))))))).)))))..
Structure
aaa ca uC U C UC cauc ugguu aaaaacgu GGGCU CCAU UCUU CCAGCcua u ||||| |||||||| ||||| |||| |||| |||||||| accaa uuuuugcA UCUGA GGUA AGAA GGUcgggu c -aa -c CA C A -C ccaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chrX: 2369043-2369139 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cel-mir-74
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cel-miR-74-3p
| Accession | MIMAT0000046 |
| Description | Caenorhabditis elegans cel-miR-74-3p mature miRNA |
| Sequence | 61 - UGGCAAGAAAUGGCAGUCUACA - 82 |
| Evidence |
experimental
cloned [1-3], 454 [4], Illumina [5,7], CLIPseq [6] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-74-5p
| Accession | MIMAT0020320 |
| Description | Caenorhabditis elegans cel-miR-74-5p mature miRNA |
| Sequence | 20 - CGGGCUUCCAUCUCUUUCCCAGC - 42 |
| Evidence |
experimental
Illumina [7] |
| Database links |
|
References
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