Accession
MI0000034
Description
Caenorhabditis elegans
cel-mir-63 precursor miRNA
Literature search
4 open access papers mention cel-mir-63
(5 sentences)
(5 sentences)
Sequence
284955
reads,
1712
reads per million, 16 experiments
ucaacaagcagacacaauuUCUAACUCGUCGGUAGUCAUCGUucuagcugaaaaggacacUAUGACACUGAAGCGAGUUGGAAAuagugguucuacuugagcaa
....((((.((((((.(((((((((((((((((.(((((.(((((........)))))...)))))))))..))))))))))))).)))..))).)))).....
....((((.((((((.(((((((((((((((((.(((((.(((((........)))))...)))))))))..))))))))))))).)))..))).)))).....
Structure
-ucaa c -- a -- A --C agc
caag aga cac auuUCUAACUCGU CGGU GUCAU GUucu u
|||| ||| ||| ||||||||||||| |||| ||||| |||||
guuc ucu gug uAAAGGUUGAGCG GUCA CAGUA cagga g
aacga a ug a AA - Uca aaa
Annotation confidence
High
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Genome context
chrX: 17598765-17598868 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cel-mir-63
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cel-miR-63-5p
| Accession | MIMAT0015104 |
| Description | Caenorhabditis elegans cel-miR-63-5p mature miRNA |
| Sequence | 20 - UCUAACUCGUCGGUAGUCAUCGU - 42 |
| Evidence |
experimental
CLIPseq [5] |
| Database links |
|
Mature cel-miR-63-3p
| Accession | MIMAT0000035 |
| Description | Caenorhabditis elegans cel-miR-63-3p mature miRNA |
| Sequence | 61 - UAUGACACUGAAGCGAGUUGGAAA - 84 |
| Evidence |
experimental
cloned [1-2], 454 [3], Illumina [4], CLIPseq [5] |
| Database links |
|
| Predicted targets |
|
References
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