Accession
MI0000318
Description
Caenorhabditis elegans
cel-mir-242 precursor miRNA mir-242
Gene
family?
family?
RF00898;
mir-242
Literature search
1 open access papers mention cel-mir-242
(1 sentences)
(1 sentences)
Sequence
34880
reads,
107.0
reads per million, 91 experiments
uggcucgcgagaguaUUGCGUAGGCCUUUGCUUCGAgagagaagcuucaguUCGCAGCAAUAUCCUCCGCAAAacuuuccccggcuaugcaaaaaa
(((((.(.((((((.(((((.(((...(((((.((((.(((....)))..)))).)))))...))).))))).)))))).).))))).........
(((((.(.((((((.(((((.(((...(((((.((((.(((....)))..)))).)))))...))).))))).)))))).).))))).........
Structure
--------- c c a U CCU U -a a
uggcu g gagagu UUGCG AGG UUGCU CGAg gag a
||||| | |||||| ||||| ||| ||||| |||| |||
aucgg c cuuuca AACGC UCC AACGA GCUu cuu g
aaaaaacgu c c A C UAU C ga c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chrIV: 4274247-4274342 [+]
Database links
Mature cel-miR-242-5p
| Accession | MIMAT0000298 |
| Description | Caenorhabditis elegans cel-miR-242-5p mature miRNA |
| Sequence | 16 - UUGCGUAGGCCUUUGCUUCGA - 36 |
| Evidence |
experimental
cloned [1-2], Northern [1], Illumina [3], CLIPseq [4] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-242-3p
| Accession | MIMAT0053604 |
| Description | Caenorhabditis elegans cel-miR-242-3p mature miRNA |
| Sequence | 52 - UCGCAGCAAUAUCCUCCGCAAA - 73 |
| Evidence |
experimental
cloned [1-2], Northern [1], Illumina [3], CLIPseq [4] |
References
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