Stem-loop cbr-mir-255

Accession

MI0005430

Description

Caenorhabditis briggsae cbr-mir-255 precursor miRNA

Sequence

147 reads, 20.0 reads per million, 3 experiments

gaugucucuucauuaucagGUAAGAAAUCUUUGUAGUUUUCcgcgagucaacgugaAAACUGAAGAGAUUUUUUACAGauuccggaggagcauc
((((.((((((...(((..(((((((((((((.((((((((.(((......))))))))))).))))))))))))).)))....))))))))))

Structure

    u      -auu   ag             G        c   ag 
gaug cucuuc    auc  GUAAGAAAUCUUU UAGUUUUC gcg  u
|||| ||||||    |||  ||||||||||||| |||||||| |||   
cuac gaggag    uaG  CAUUUUUUAGAGA GUCAAAag ugc  c
    -      gccu   -A             A        -   aa 

Annotation confidence High

Genome context

chrV: 11365767-11365860 [+]

Mature cbr-miR-255-5p

• Accession: MIMAT0053568
• Description: Caenorhabditis briggsae cbr-miR-255-5p mature miRNA
• Sequence: 20 - GUAAGAAAUCUUUGUAGUUUUC - 41
• Evidence: not_experimental

Mature cbr-miR-255-3p

• Accession: MIMAT0004297
• Description: Caenorhabditis briggsae cbr-miR-255-3p mature miRNA
• Sequence: 57 - AAACUGAAGAGAUUUUUUACAG - 78
• Evidence: not_experimental

References

1. PubMed ID: 17174894
   Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
   "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
   "Cell (2006) 127:1193-1207